Research Resources
Technical
- NMR relaxation times at 3T (Wansapura et al., JMRI 1999)
- Gray matter T1/T2/T2* = 1331/80/42-52 ms
- White matter T1/T2/T2* = 832/110/45-49 ms
- Web-based database of relaxation times and Ernst angle calculator
- Inversion time calculator (Excel download)
- Copper Sulfate Phantom with R1 (1/T1) of blood at 3T (Rough estimate since few TI values were used, all <1400 ms, TR = 8000 ms) Inversion recovery fitting
This plot shows the inversion recover curve for different concentrations of Copper Sulphate. 
This plot can be used to prepare a phantom to measure T1 and test MRI sequences using Copper Sulphate and water. - MRI Safety Resource
Statistics
- The Statistics of fMRI data - Martin Lindquist
- Excel FDR correction
General/Software
- Unix tutorial
- FSLutils
- Harvard-Oxford Atlas Regions
- Jet Look-up table for FSL. (Download jet.lut)
- DICOM fields lookupSlice number = InstanceNumber
- NIFTI fiile format
Grant writing
Zotero style with PMCID. Note that Zotero may not populate the 'Extra' field with the PMID or PMCID if the references was not added to the library from pubmed. If needed. they can be entered manually.